Transcript: ENST00000541720.1 SETD9-201

Description

SET domain containing 9 [Source:HGNC Symbol;Acc:28508]

Gene Synonyms

C5orf35, MGC33648

Location

Chromosome 5: 56,205,087-56,221,359 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features, is associated with 7084 variant alleles and maps to 244 oligo probes.

Gene

This transcript is a product of gene ENSG00000155542.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000285947.2	SETD9-001	1619	299aa	ENSP00000285947.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3972	Q8NE22	NM_153706.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541720.1	SETD9-201	1398	271aa	ENSP00000442886.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54857	Q8NE22	NM_001171990.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423328.1	SETD9-006	417	49aa	ENSP00000406183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J935	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000418299.1	SETD9-002	1009	39aa	ENSP00000398449.1	Nonsense mediated decay		F8WBJ9	-	-
ENST00000475908.1	SETD9-003	905	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463805.1	SETD9-004	786	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472636.1	SETD9-005	606	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498322.1	SETD9-010	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480414.1	SETD9-008	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477359.1	SETD9-009	449	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,398 bps, Translation length: 271 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NE22

CCDS

This transcript is a member of the Human CCDS set: CCDS54857

Version

ENST00000541720.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000541720.1 SETD9-201

Summary