Transcript: ENST00000409483.1 PTPRN2-002

Description

protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:HGNC Symbol;Acc:9677]

Gene Synonyms

IA-2beta, IAR, ICAAR, KIAA0387, PTPRP, R-PTP-N2, phogrin

Location

Chromosome 7: 157,331,750-158,380,480 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 23 domains and features, is associated with 563282 variant alleles and maps to 757 oligo probes.

Gene

This transcript is a product of gene ENSG00000155093.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389418.4	PTPRN2-005	4706	1015aa	ENSP00000374069.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5947	Q92932 Q9NSR5	NM_002847.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389413.3	PTPRN2-003	4723	986aa	ENSP00000374064.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5949	Q92932 Q9NSR5	NM_130843.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409483.1	PTPRN2-002	4711	977aa	ENSP00000387114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EM83 Q9NSR5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389416.4	PTPRN2-004	4692	998aa	ENSP00000374067.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5948	Q92932 Q9NSR5	NM_130842.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404321.2	PTPRN2-201	3117	1038aa	ENSP00000385464.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q92932 Q9NSR5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 4,711 bps, Translation length: 977 residues

Version

ENST00000409483.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000327120 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000409483.1 PTPRN2-002

Summary