Transcript: ENST00000533451.1 UBASH3B-005

Description

ubiquitin associated and SH3 domain containing B [Source:HGNC Symbol;Acc:29884]

Gene Synonyms

KIAA1959, STS-1, STS1, TULA-2, p70

Location

Chromosome 11: 122,646,342-122,650,410 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1875 variant alleles and maps to 65 oligo probes.

Gene

This transcript is a product of gene ENSG00000154127.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000284273.5	UBASH3B-001	6912	649aa	ENSP00000284273.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31694	Q8TF42	NM_032873.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525711.1	UBASH3B-002	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526386.1	UBASH3B-003	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526493.1	UBASH3B-007	1163	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533451.1	UBASH3B-005	1032	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530917.1	UBASH3B-004	987	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000529998.1	UBASH3B-006	698	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530578.1	UBASH3B-008	532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,032 bps,

Version

ENST00000533451.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000387503 (version 1)

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Transcript: ENST00000533451.1 UBASH3B-005

Summary