Transcript: ENST00000371347.5 SLC25A27-001

Description

solute carrier family 25, member 27 [Source:HGNC Symbol;Acc:21065]

Gene Synonyms

FLJ33552, UCP4

Location

Chromosome 6: 46,620,678-46,645,930 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 10389 variant alleles and maps to 699 oligo probes.

Gene

This transcript is a product of gene ENSG00000153291.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371347.5	SLC25A27-001	2963	323aa	ENSP00000360398.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43470	B4DHR4 O95847	NM_004277.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452689.2	SLC25A27-202	1602	237aa	ENSP00000412223.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZG4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411689.2	SLC25A27-201	1322	245aa	ENSP00000412024.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56431	O95847	NM_001204052.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000603486.1	SLC25A27-004	659	149aa	ENSP00000474781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VTS8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000604616.1	SLC25A27-005	650	98aa	ENSP00000473804.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000604217.1	SLC25A27-003	433	145aa	ENSP00000474429.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000604127.1	SLC25A27-002	837	145aa	ENSP00000474828.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000604908.1	SLC25A27-007	576	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000603501.1	SLC25A27-006	355	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,963 bps, Translation length: 323 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95847

CCDS

This transcript is a member of the Human CCDS set: CCDS43470

Version

ENST00000371347.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000040791 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000371347.5 SLC25A27-001

Summary