Transcript: ENST00000283131.3 SMARCA5-001

Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:11101]

Gene Synonyms

ISWI, SNF2H, WCRF135, hISWI, hSNF2H

Location

About this transcript

This transcript has 24 exons, is annotated with 31 domains and features, is associated with 18992 variant alleles and maps to 1201 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000283131.3	SMARCA5-001	7923	1052aa	ENSP00000283131.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3761	O60264 Q4W5G3 Q4W5H1	NM_003601.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515531.1	SMARCA5-004	529	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508573.1	SMARCA5-006	363	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 24, Transcript length: 7,923 bps, Translation length: 1,052 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60264

CCDS

This transcript is a member of the Human CCDS set: CCDS3761

Version

ENST00000283131.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000365077 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.