Transcript: ENST00000536711.1 MED21-006

Description

mediator complex subunit 21 [Source:HGNC Symbol;Acc:11473]

Gene Synonyms

SRB7, SURB7, hSrb7

Location

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 2626 variant alleles and maps to 196 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000282892.3	MED21-001	1753	144aa	ENSP00000282892.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8711	Q13503	NM_004264.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546323.1	MED21-005	575	159aa	ENSP00000442126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H872	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536711.1	MED21-006	578	87aa	ENSP00000444297.1	Nonsense mediated decay		F5GZQ1	-	-
ENST00000536503.1	MED21-002	1374	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000544998.1	MED21-004	678	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000538186.1	MED21-003	552	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 578 bps, Translation length: 87 residues

Version

ENST00000536711.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000403264 (version 1)