Transcript: ENST00000342512.3 PANK1-001

Description

pantothenate kinase 1 [Source:HGNC Symbol;Acc:8598]

Gene Synonyms

MGC24596, PANK, PANK1a, PANK1b

Location

Chromosome 10: 91,342,745-91,403,644 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 23686 variant alleles and maps to 336 oligo probes.

Gene

This transcript is a product of gene ENSG00000152782.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307534.4	PANK1-201	3367	598aa	ENSP00000302108.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31244	Q8TE04	NM_148977.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371774.2	PANK1-202	2800	400aa	ENSP00000360839.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TE04	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342512.3	PANK1-001	2703	373aa	ENSP00000345118.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7406	Q8TE04	NM_148978.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000322191.6	PANK1-002	2513	314aa	ENSP00000318526.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7405	Q8TE04	NM_138316.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488482.1	PANK1-003	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461829.1	PANK1-004	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,703 bps, Translation length: 373 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TE04

CCDS

This transcript is a member of the Human CCDS set: CCDS7406

Version

ENST00000342512.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000049317 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000342512.3 PANK1-001

Summary