Transcript: ENST00000497649.2 MEPE-003

Description

matrix extracellular phosphoglycoprotein [Source:HGNC Symbol;Acc:13361]

Gene Synonyms

OF45

Location

Chromosome 4: 88,754,102-88,767,940 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 5812 variant alleles and maps to 339 oligo probes.

Gene

This transcript is a product of gene ENSG00000152595.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000424957.3	MEPE-201	2022	525aa	ENSP00000416984.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3625	Q9NQ76	NM_001184694.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000497649.2	MEPE-003	2226	501aa	ENSP00000422747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAC8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560249.1	MEPE-203	2206	412aa	ENSP00000453994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54776	Q9NQ76	NM_001184697.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540395.1	MEPE-202	2135	412aa	ENSP00000443491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54776	Q9NQ76	NM_001184696.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395102.4	MEPE-001	2123	556aa	ENSP00000378534.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAC8 Q9NQ76	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361056.3	MEPE-002	1986	525aa	ENSP00000354341.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3625	Q9NQ76	NM_020203.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511670.1	MEPE-004	550	96aa	ENSP00000421430.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RFW6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508016.1	MEPE-005	2177	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515821.1	MEPE-006	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 2,226 bps, Translation length: 501 residues

Version

ENST00000497649.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000253039 (version 5)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000497649.2 MEPE-003

Summary