Transcript: ENST00000282356.4 CAMK4-001

Description

calcium/calmodulin-dependent protein kinase IV [Source:HGNC Symbol;Acc:1464]

Gene Synonyms

CAMK, CAMK-GR, CAMKIV, CaMK IV, CaMK-GR, IV, caMK

Location

Chromosome 5: 110,559,784-110,830,584 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 14 domains and features, is associated with 123864 variant alleles and maps to 887 oligo probes.

Gene

This transcript is a product of gene ENSG00000152495.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000282356.4	CAMK4-001	12240	473aa	ENSP00000282356.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4103	D6RE65 Q16566	NM_001744.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512453.1	CAMK4-004	1640	473aa	ENSP00000422634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4103	D6RE65 Q16566	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508074.1	CAMK4-005	557	142aa	ENSP00000426940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RE65	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000515231.1	CAMK4-003	1678	88aa	ENSP00000424912.1	Nonsense mediated decay		D6RCD6	-	-
ENST00000514007.1	CAMK4-010	852	109aa	ENSP00000421606.1	Nonsense mediated decay		D6REY7	-	-
ENST00000504544.1	CAMK4-009	571	88aa	ENSP00000423761.1	Nonsense mediated decay		D6RCD6	-	-
ENST00000512890.1	CAMK4-012	803	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505763.1	CAMK4-007	788	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510858.1	CAMK4-013	782	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509408.1	CAMK4-011	599	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502916.1	CAMK4-008	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504090.1	CAMK4-006	548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509645.1	CAMK4-002	2560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 12,240 bps, Translation length: 473 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16566

CCDS

This transcript is a member of the Human CCDS set: CCDS4103

Version

ENST00000282356.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250719 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000282356.4 CAMK4-001

Summary