Transcript: ENST00000378325.3 SUV39H2-006

Description

suppressor of variegation 3-9 homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:17287]

Gene Synonyms

FLJ23414, KMT1B

Location

Chromosome 10: 14,920,862-14,945,084 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 17 domains and features, is associated with 11572 variant alleles and maps to 325 oligo probes.

Gene

This transcript is a product of gene ENSG00000152455.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354919.6	SUV39H2-002	1233	410aa	ENSP00000346997.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53494	C9IYH9 C9JMB4 Q9H5I1	NM_001193424.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000313519.5	SUV39H2-008	3087	350aa	ENSP00000319208.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7104	C9IYH9 C9JMB4 Q9H5I1	NM_024670.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358298.6	SUV39H2-001	1611	176aa	ENSP00000351046.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000378325.3	SUV39H2-006	1292	230aa	ENSP00000367576.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53493	Q5JSS2 Q9H5I1	NM_001193427.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433779.1	SUV39H2-003	719	152aa	ENSP00000388968.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JSS2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000420416.1	SUV39H2-004	704	220aa	ENSP00000392201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IYH9 C9JMB4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000412254.1	SUV39H2-005	688	95aa	ENSP00000388218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMB4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000378331.5	SUV39H2-007	2959	45aa	ENSP00000367582.5	Nonsense mediated decay		G5E9A8	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,292 bps, Translation length: 230 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H5I1

CCDS

This transcript is a member of the Human CCDS set: CCDS53493

Version

ENST00000378325.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000046951 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000378325.3 SUV39H2-006

Summary