Transcript: ENST00000493518.1 CACUL1-002

Description

CDK2-associated, cullin domain 1 [Source:HGNC Symbol;Acc:23727]

Gene Synonyms

C10orf46, CAC1, FLJ40409, MGC33215

Location

Chromosome 10: 120,444,068-120,514,761 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 8 domains and features, is associated with 29659 variant alleles and maps to 543 oligo probes.

Gene

This transcript is a product of gene ENSG00000151893.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369151.3	CACUL1-001	6733	369aa	ENSP00000358147.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41570	Q86Y37	NM_153810.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340214.4	CACUL1-201	1396	303aa	ENSP00000342487.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86Y37	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493518.1	CACUL1-002	3217	303aa	ENSP00000431329.1	Nonsense mediated decay		Q86Y37	-	-
ENST00000544392.1	CACUL1-008	1060	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489169.1	CACUL1-006	517	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481360.1	CACUL1-005	435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477583.1	CACUL1-004	432	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000490610.1	CACUL1-007	394	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 7, Transcript length: 3,217 bps, Translation length: 303 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86Y37

Version

ENST00000493518.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000050613 (version 4)

Favourite species

All species

Recent locations

Transcript: ENST00000493518.1 CACUL1-002

Summary