Transcript: ENST00000506181.1 TDO2-008

Description

tryptophan 2,3-dioxygenase [Source:HGNC Symbol;Acc:11708]

Gene Synonyms

TDO, TO, TPH2, TRPO

Location

Chromosome 4: 156,775,909-156,786,254 forward strand.

About this transcript

This transcript has 4 exons, is associated with 4662 variant alleles and maps to 66 oligo probes.

Gene

This transcript is a product of gene ENSG00000151790.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000536354.2	TDO2-001	1701	406aa	ENSP00000444788.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34086	D6RA50 D6RB68 P48775	NM_005651.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506072.1	TDO2-006	665	65aa	ENSP00000423394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA50 D6RB68	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507590.1	TDO2-007	557	49aa	ENSP00000424384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RB68	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506181.1	TDO2-008	779	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503634.1	TDO2-005	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510293.1	TDO2-004	379	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512584.1	TDO2-002	3139	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509738.1	TDO2-003	935	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 779 bps,

Version

ENST00000506181.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000366468 (version 1)

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Transcript: ENST00000506181.1 TDO2-008

Summary