Transcript: ENST00000504342.1 ACSL1-002

Description

acyl-CoA synthetase long-chain family member 1 [Source:HGNC Symbol;Acc:3569]

Gene Synonyms

ACS1, FACL1, FACL2, LACS, LACS1, LACS2

Location

Chromosome 4: 185,678,175-185,733,413 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 12 domains and features, is associated with 23721 variant alleles and maps to 435 oligo probes.

Gene

This transcript is a product of gene ENSG00000151726.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000515030.1	ACSL1-011	3948	698aa	ENSP00000422607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3839	B7Z3Z9 P33121	NM_001286708.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000281455.2	ACSL1-001	3832	698aa	ENSP00000281455.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3839	B7Z3Z9 P33121	NM_001995.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000454703.2	ACSL1-005	3636	527aa	ENSP00000407165.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z3Z9	NM_001286712.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437665.3	ACSL1-201	2646	527aa	ENSP00000405687.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z3Z9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507295.1	ACSL1-006	2490	664aa	ENSP00000426244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68825	B7Z3Z9 E7EPM6	NM_001286711.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513317.1	ACSL1-007	2469	698aa	ENSP00000426150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68826	B7Z452 Q108N1	NM_001286710.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503407.1	ACSL1-009	2409	294aa	ENSP00000425098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9U7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000504342.1	ACSL1-002	2333	698aa	ENSP00000425006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3839	B7Z3Z9 P33121	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504900.1	ACSL1-004	1583	388aa	ENSP00000424935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RER0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505492.1	ACSL1-008	280	94aa	ENSP00000425640.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q108N2	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000506733.1	ACSL1-003	2646	126aa	ENSP00000426491.1	Nonsense mediated decay		D6RG07	-	-
ENST00000513001.1	ACSL1-010	2796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 2,333 bps, Translation length: 698 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P33121

CCDS

This transcript is a member of the Human CCDS set: CCDS3839

Version

ENST00000504342.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000361099 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000504342.1 ACSL1-002

Summary