Transcript: ENST00000495933.1 PIGF-003

Description

phosphatidylinositol glycan anchor biosynthesis, class F [Source:HGNC Symbol;Acc:8962]

Location

Chromosome 2: 46,839,367-46,844,169 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 2603 variant alleles and maps to 220 oligo probes.

Gene

This transcript is a product of gene ENSG00000151665.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000281382.6	PIGF-001	1372	219aa	ENSP00000281382.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1827	E5RIN5 Q07326 Q6IB04	NM_002643.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000306465.4	PIGF-002	1061	206aa	ENSP00000302663.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1828	E5RIN5 Q07326	NM_173074.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474980.1	PIGF-006	619	49aa	ENSP00000429355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIN5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000412717.1	PIGF-004	737	112aa	ENSP00000413202.1	Nonsense mediated decay		E5RIN5 F8WEN5	-	-
ENST00000420164.1	PIGF-007	586	57aa	ENSP00000410361.1	Nonsense mediated decay		H7C392	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000495933.1	PIGF-003	3454	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482786.1	PIGF-005	855	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 3,454 bps,

Version

ENST00000495933.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000329339 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000495933.1 PIGF-003

Summary