Transcript: ENST00000512718.3 CSNK1G3-004

Description

casein kinase 1, gamma 3 [Source:HGNC Symbol;Acc:2456]

Gene Synonyms

CKI-gamma 3, CSNK1G3L

Location

Chromosome 5: 122,847,954-122,950,254 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 10 domains and features, is associated with 44049 variant alleles and maps to 427 oligo probes.

Gene

This transcript is a product of gene ENSG00000151292.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395412.1	CSNK1G3-203	4462	455aa	ENSP00000378807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43355	Q9Y6M4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395411.1	CSNK1G3-202	4438	447aa	ENSP00000378806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4135	Q9Y6M4	NM_004384.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345990.4	CSNK1G3-201	4366	423aa	ENSP00000334735.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34218	Q9Y6M4	NM_001270573.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360683.2	CSNK1G3-002	4047	455aa	ENSP00000353904.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43355	Q9Y6M4	NM_001044723.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521364.1	CSNK1G3-009	2580	423aa	ENSP00000429412.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34218	Q9Y6M4	NM_001270572.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361991.2	CSNK1G3-001	2424	447aa	ENSP00000354942.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4135	Q9Y6M4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510842.2	CSNK1G3-003	1979	424aa	ENSP00000423838.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59491	Q9Y6M4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512718.3	CSNK1G3-004	1569	348aa	ENSP00000421998.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59492	Q9Y6M4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511130.2	CSNK1G3-005	1356	311aa	ENSP00000421385.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59493	Q9Y6M4	NM_001270574.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515322.2	CSNK1G3-008	1115	164aa	ENSP00000429914.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508708.1	CSNK1G3-007	920	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000514131.1	CSNK1G3-006	253	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 10, Transcript length: 1,569 bps, Translation length: 348 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y6M4

CCDS

This transcript is a member of the Human CCDS set: CCDS59492

Version

ENST00000512718.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000371239 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000512718.3 CSNK1G3-004

Summary