Transcript: ENST00000280871.4 SLC2A13-001

Description

solute carrier family 2 (facilitated glucose transporter), member 13 [Source:HGNC Symbol;Acc:15956]

Gene Synonyms

HMIT

Location

About this transcript

This transcript has 10 exons, is annotated with 35 domains and features, is associated with 148157 variant alleles and maps to 567 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000280871.4	SLC2A13-001	7003	648aa	ENSP00000280871.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8736	Q96QE2	NM_052885.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380858.1	SLC2A13-002	3082	357aa	ENSP00000370239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PE47 Q86X07	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000465517.1	SLC2A13-003	1026	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505338.1	SLC2A13-004	436	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 7,003 bps, Translation length: 648 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96QE2

CCDS

This transcript is a member of the Human CCDS set: CCDS8736

Version

ENST00000280871.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000132849 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.