Transcript: ENST00000548997.1 PLBD2-002

Description

phospholipase B domain containing 2 [Source:HGNC Symbol;Acc:27283]

Gene Synonyms

P76, p76

Location

About this transcript

This transcript has 4 exons, is associated with 6899 variant alleles and maps to 120 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000280800.3	PLBD2-001	2573	589aa	ENSP00000280800.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9168	Q8NHP8	NM_173542.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545182.2	PLBD2-004	2321	557aa	ENSP00000443463.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53834	F5H5E2	NM_001159727.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548997.1	PLBD2-002	465	52aa	ENSP00000450343.1	Nonsense mediated decay		H0YIX0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000547163.1	PLBD2-003	598	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 465 bps, Translation length: 52 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000548997.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000404836 (version 1)