Transcript: ENST00000280800.3 PLBD2-001

Description

phospholipase B domain containing 2 [Source:HGNC Symbol;Acc:27283]

Gene Synonyms

P76, p76

Location

About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 13798 variant alleles and maps to 416 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000280800.3	PLBD2-001	2573	589aa	ENSP00000280800.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9168	Q8NHP8	NM_173542.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545182.2	PLBD2-004	2321	557aa	ENSP00000443463.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53834	F5H5E2	NM_001159727.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000548997.1	PLBD2-002	465	52aa	ENSP00000450343.1	Nonsense mediated decay		H0YIX0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000547163.1	PLBD2-003	598	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,573 bps, Translation length: 589 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NHP8

CCDS

This transcript is a member of the Human CCDS set: CCDS9168

Version

ENST00000280800.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000404835 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.