Transcript: ENST00000509248.1 SLC7A11-002

Description

solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 [Source:HGNC Symbol;Acc:11059]

Gene Synonyms

CCBR1, xCT

Location

About this transcript

This transcript has 7 exons, is annotated with 2 domains and features, is associated with 20208 variant alleles and maps to 254 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000280612.5	SLC7A11-001	9645	501aa	ENSP00000280612.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3742	Q4W5A5 Q9P1X0 Q9UPY5	NM_014331.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509248.1	SLC7A11-002	797	75aa	ENSP00000424046.1	Nonsense mediated decay		H0Y9F9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 4, Transcript length: 797 bps, Translation length: 75 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000509248.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000364387 (version 1)