Transcript: ENST00000280193.2 VEGFC-001

Description

vascular endothelial growth factor C [Source:HGNC Symbol;Acc:12682]

Gene Synonyms

Flt4-L, VRP

Location

About this transcript

This transcript has 7 exons, is annotated with 13 domains and features, is associated with 48218 variant alleles and maps to 485 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000280193.2	VEGFC-001	2067	420aa	ENSP00000280193.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43285	P49767	NM_005429.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507638.1	VEGFC-002	759	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,067 bps, Translation length: 420 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49767

CCDS

This transcript is a member of the Human CCDS set: CCDS43285

Version

ENST00000280193.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000361991 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.