Transcript: ENST00000382533.4 SAP18-001

Description

Sin3A-associated protein, 18kDa [Source:HGNC Symbol;Acc:10530]

Gene Synonyms

2HOR0202, MGC27131, SAP18P, SAP18p

Location

Chromosome 13: 21,714,653-21,723,221 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 4175 variant alleles and maps to 581 oligo probes.

Gene

This transcript is a product of gene ENSG00000150459.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382533.4	SAP18-001	2298	172aa	ENSP00000371973.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9295	U3KPY7	NM_005870.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000607003.1	SAP18-009	2234	153aa	ENSP00000475925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O00422 U3KPY7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467636.1	SAP18-005	670	78aa	ENSP00000475358.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KPY7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000450573.1	SAP18-008	479	143aa	ENSP00000391846.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZW6 U3KPY7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000492245.1	SAP18-006	405	59aa	ENSP00000475435.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000485646.1	SAP18-004	804	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471009.1	SAP18-007	670	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,298 bps, Translation length: 172 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS9295

Version

ENST00000382533.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044109 (version 3)

Annotation Attributes

RP supported TIS [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000382533.4 SAP18-001

Summary