Transcript: ENST00000537324.1 ORAOV1-015

Description

oral cancer overexpressed 1 [Source:HGNC Symbol;Acc:17589]

Gene Synonyms

TAOS1

Location

Chromosome 11: 69,482,377-69,483,166 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 438 variant alleles and maps to 132 oligo probes.

Gene

This transcript is a product of gene ENSG00000149716.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000279147.4	ORAOV1-001	2478	137aa	ENSP00000279147.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8192	Q8WV07	NM_153451.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536870.1	ORAOV1-004	2274	78aa	ENSP00000441984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GWS9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537272.2	ORAOV1-010	988	62aa	ENSP00000455359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000539414.1	ORAOV1-014	817	124aa	ENSP00000444112.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZY6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542341.1	ORAOV1-003	775	76aa	ENSP00000437367.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6T8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535657.1	ORAOV1-009	709	137aa	ENSP00000446129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8192	Q8WV07	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538554.2	ORAOV1-017	556	150aa	ENSP00000446428.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXG7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000535542.1	ORAOV1-011	951	36aa	ENSP00000443669.1	Nonsense mediated decay		F5H8D9	-	-
ENST00000543562.1	ORAOV1-007	444	43aa	ENSP00000443936.1	Nonsense mediated decay		F5H179	-	-
ENST00000441922.2	ORAOV1-005	359	70aa	ENSP00000409643.2	Nonsense mediated decay		A6YPU5	-	-
ENST00000542515.1	ORAOV1-018	2299	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569105.1	ORAOV1-019	696	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000537324.1	ORAOV1-015	625	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000543863.1	ORAOV1-012	533	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000544096.1	ORAOV1-002	3776	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000543023.1	ORAOV1-008	845	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000542470.1	ORAOV1-013	838	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000355486.3	ORAOV1-006	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 625 bps,

Version

ENST00000537324.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000396828 (version 1)

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Transcript: ENST00000537324.1 ORAOV1-015

Summary