Transcript: ENST00000529622.1 TAGLN-004

Description

transgelin [Source:HGNC Symbol;Acc:11553]

Gene Synonyms

DKFZp686P11128, SM22, SMCC, TAGLN1, WS3-10

Location

Chromosome 11: 117,073,860-117,075,121 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 20 domains and features, is associated with 819 variant alleles and maps to 259 oligo probes.

Gene

This transcript is a product of gene ENSG00000149591.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000532870.1	TAGLN-003	2166	201aa	ENSP00000432282.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8381	E9PJ32 Q01995 Q5U0D2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000278968.6	TAGLN-006	1477	201aa	ENSP00000278968.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8381	E9PJ32 Q01995 Q5U0D2	-	-
ENST00000530649.1	TAGLN-005	1227	201aa	ENSP00000431941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8381	E9PJ32 Q01995 Q5U0D2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525531.1	TAGLN-008	1048	201aa	ENSP00000432054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8381	E9PJ32 Q01995 Q5U0D2	-	-
ENST00000392951.4	TAGLN-001	928	201aa	ENSP00000376678.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8381	E9PJ32 Q01995 Q5U0D2	NM_003186.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529622.1	TAGLN-004	501	151aa	ENSP00000432380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000529792.1	TAGLN-007	375	91aa	ENSP00000431862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ32	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533863.1	TAGLN-002	3298	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 501 bps, Translation length: 151 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000529622.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000392865 (version 1)

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Transcript: ENST00000529622.1 TAGLN-004

Summary