Transcript: ENST00000609981.1 PLCH2-010

Description

phospholipase C, eta 2 [Source:HGNC Symbol;Acc:29037]

Gene Synonyms

KIAA0450, PLC-eta2, PLCL4, PLCeta2, RP3-395M20.1

Location

Chromosome 1: 2,357,419-2,411,243 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 28047 variant alleles and maps to 215 oligo probes.

Gene

This transcript is a product of gene ENSG00000149527.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000449969.1	PLCH2-008	5450	1129aa	ENSP00000397289.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O75038	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419816.2	PLCH2-009	4837	1416aa	ENSP00000389803.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O75038	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378486.3	PLCH2-202	4837	1416aa	ENSP00000367747.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59959	O75038	NM_014638.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378488.3	PLCH2-203	4729	1380aa	ENSP00000367749.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O75038	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000278878.6	PLCH2-002	3781	1239aa	ENSP00000278878.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000288766.5	PLCH2-201	1909	499aa	ENSP00000288766.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NGX9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000609981.1	PLCH2-010	568	111aa	ENSP00000476436.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473964.1	PLCH2-005	6986	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000343889.4	PLCH2-001	6453	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462379.1	PLCH2-006	2341	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 568 bps, Translation length: 111 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000609981.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000472710 (version 1)

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Transcript: ENST00000609981.1 PLCH2-010

Summary