Transcript: ENST00000278849.4 INCENP-002

Description

inner centromere protein antigens 135/155kDa [Source:HGNC Symbol;Acc:6058]

Gene Synonyms

FLJ31633

Location

Chromosome 11: 61,891,470-61,920,224 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 14 domains and features, is associated with 12939 variant alleles and maps to 622 oligo probes.

Gene

This transcript is a product of gene ENSG00000149503.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394818.3	INCENP-001	3964	918aa	ENSP00000378295.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44624	E9PM67 Q9NQS7	NM_001040694.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000278849.4	INCENP-002	3698	914aa	ENSP00000278849.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31582	E9PM67 Q9NQS7	NM_020238.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533896.1	INCENP-004	570	167aa	ENSP00000433100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PM67	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000531099.1	INCENP-006	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528037.1	INCENP-003	1372	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000528375.1	INCENP-005	808	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 3,698 bps, Translation length: 914 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NQS7

CCDS

This transcript is a member of the Human CCDS set: CCDS31582

Version

ENST00000278849.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000394850 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000278849.4 INCENP-002

Summary