Transcript: ENST00000542946.1 TMEM138-009

Description

transmembrane protein 138 [Source:HGNC Symbol;Acc:26944]

Gene Synonyms

HSPC196

Location

Chromosome 11: 61,129,833-61,136,028 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 2668 variant alleles and maps to 447 oligo probes.

Gene

This transcript is a product of gene ENSG00000149483.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000278826.6	TMEM138-001	1848	162aa	ENSP00000278826.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8005	J3QSZ6 Q9NPI0	NM_016464.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542946.1	TMEM138-009	2839	105aa	ENSP00000445792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NPI0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381787.2	TMEM138-011	1205	104aa	ENSP00000371206.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QSZ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540194.1	TMEM138-006	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000545420.1	TMEM138-007	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000451389.2	TMEM138-010	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000423772.2	TMEM138-008	2068	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000539776.1	TMEM138-012	1635	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000507563.2	TMEM138-004	1134	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534963.1	TMEM138-002	740	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000543594.1	TMEM138-005	611	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000543833.1	TMEM138-013	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,839 bps, Translation length: 105 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NPI0

Version

ENST00000542946.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000398402 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000542946.1 TMEM138-009

Summary