Transcript: ENST00000278742.5 ST14-001

Description

suppression of tumorigenicity 14 (colon carcinoma) [Source:HGNC Symbol;Acc:11344]

Gene Synonyms

HAI, MT-SP1, MTSP1, PRSS14, SNC19, TADG15, TMPRSS14

Location

About this transcript

This transcript has 19 exons, is annotated with 56 domains and features, is associated with 23720 variant alleles and maps to 696 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000278742.5	ST14-001	3539	855aa	ENSP00000278742.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8487	Q8WVC1 Q9Y5Y6	NM_021978.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530532.1	ST14-005	1185	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524718.1	ST14-003	922	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530376.1	ST14-006	861	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,539 bps, Translation length: 855 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y5Y6

CCDS

This transcript is a member of the Human CCDS set: CCDS8487

Version

ENST00000278742.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000386119 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.