Transcript: ENST00000543092.1 HTR3B-003

Description

5-hydroxytryptamine (serotonin) receptor 3B, ionotropic [Source:HGNC Symbol;Acc:5298]

Gene Synonyms

5-HT3B

Location

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 6029 variant alleles and maps to 130 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000260191.2	HTR3B-001	2011	441aa	ENSP00000260191.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8364	B3VRK5 B3VRL0 B3VRL5 B3VRM0 B3VRN0 B3VRP0 O95264	NM_006028.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537778.1	HTR3B-002	1692	430aa	ENSP00000443118.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3VRK5 B3VRL0 B3VRL5 B3VRM0 B3VRN0 B3VRP0 O95264	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543092.1	HTR3B-003	612	175aa	ENSP00000440894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3VRM0 B3VRN0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 612 bps, Translation length: 175 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000543092.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000398844 (version 1)