Transcript: ENST00000534064.1 INTS4-001

Description

integrator complex subunit 4 [Source:HGNC Symbol;Acc:25048]

Gene Synonyms

INT4, MGC16733, MST093

Location

Chromosome 11: 77,589,766-77,705,724 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 11 domains and features, is associated with 48668 variant alleles and maps to 1366 oligo probes.

Gene

This transcript is a product of gene ENSG00000149262.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000534064.1	INTS4-001	3156	963aa	ENSP00000434466.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31644	Q96HW7	NM_033547.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529807.1	INTS4-003	1845	505aa	ENSP00000433644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96HW7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535943.1	INTS4-201	1382	338aa	ENSP00000441084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96HW7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527522.1	INTS4-004	956	96aa	ENSP00000435758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIM3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433818.2	INTS4-002	3459	132aa	ENSP00000407787.2	Nonsense mediated decay		F8WAA7	-	-
ENST00000534408.1	INTS4-005	1681	96aa	ENSP00000432776.1	Nonsense mediated decay		E9PIM3	-	-
ENST00000524766.1	INTS4-006	556	96aa	ENSP00000436248.1	Nonsense mediated decay		E9PIM3	-	-
ENST00000525931.1	INTS4-007	633	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525268.2	INTS4-008	402	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533180.1	INTS4-010	635	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531059.1	INTS4-009	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,156 bps, Translation length: 963 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96HW7

CCDS

This transcript is a member of the Human CCDS set: CCDS31644

Version

ENST00000534064.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000390927 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000534064.1 INTS4-001

Summary