Transcript: ENST00000376215.5 PDSS1-001

Description

prenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:HGNC Symbol;Acc:17759]

Gene Synonyms

COQ1, COQ10D2, DPS, DPS1, RP13-16H11.3, SPS, TPRT, TPT, TPT 1, hDPS1

Location

About this transcript

This transcript has 12 exons, is annotated with 10 domains and features, is associated with 20973 variant alleles and maps to 416 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000376215.5	PDSS1-001	1626	415aa	ENSP00000365388.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31168	Q5T2R2	NM_014317.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376203.5	PDSS1-201	1425	306aa	ENSP00000365376.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T2R2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491711.1	PDSS1-002	897	158aa	ENSP00000435695.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000470978.1	PDSS1-003	799	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473224.1	PDSS1-004	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,626 bps, Translation length: 415 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5T2R2

CCDS

This transcript is a member of the Human CCDS set: CCDS31168

Version

ENST00000376215.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000047276 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.