Transcript: ENST00000277526.3 LCN9-002

Description

lipocalin 9 [Source:HGNC Symbol;Acc:17442]

Gene Synonyms

9230102I19Rik, HEL129

Location

About this transcript

This transcript has 7 exons, is annotated with 13 domains and features, is associated with 1905 variant alleles and maps to 203 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000277526.3	LCN9-002	531	176aa	ENSP00000277526.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56593	Q8WX39	NM_001001676.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430290.2	LCN9-001	554	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000554343.1	LCN9-003	798	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 531 bps, Translation length: 176 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WX39

CCDS

This transcript is a member of the Human CCDS set: CCDS56593

Version

ENST00000277526.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000410711 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.