Transcript: ENST00000445012.2 SLC25A25-007

Description

solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 [Source:HGNC Symbol;Acc:20663]

Gene Synonyms

APC3, KIAA1896, MCSC, MCSC3, PCSCL, RP11-395P17.4, SCAMC-2, SCAMC2

Location

Chromosome 9: 130,863,146-130,866,116 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1325 variant alleles and maps to 104 oligo probes.

Gene

This transcript is a product of gene ENSG00000148339.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373068.2	SLC25A25-004	3431	503aa	ENSP00000362159.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35151	Q6KCM7	NM_001006641.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373066.5	SLC25A25-001	3714	501aa	ENSP00000362157.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59146	Q6KCM7	NM_001265614.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432073.2	SLC25A25-005	3678	489aa	ENSP00000410053.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48031	Q6KCM7	NM_001006642.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373064.5	SLC25A25-002	3474	469aa	ENSP00000362155.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6890	Q6KCM7	NM_052901.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373069.5	SLC25A25-003	3376	515aa	ENSP00000362160.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6KCM7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433501.1	SLC25A25-201	3264	366aa	ENSP00000401672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6KCM7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466983.1	SLC25A25-008	905	165aa	ENSP00000418600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000472769.1	SLC25A25-006	676	75aa	ENSP00000419685.1	Nonsense mediated decay		F8WEY9	-	-
ENST00000445012.2	SLC25A25-007	713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 713 bps,

Version

ENST00000445012.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000355120 (version 1)

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Transcript: ENST00000445012.2 SLC25A25-007

Summary