Transcript: ENST00000374279.3 UGCG-001

Description

UDP-glucose ceramide glucosyltransferase [Source:HGNC Symbol;Acc:12524]

Gene Synonyms

GCS, GLCT1

Location

About this transcript

This transcript has 9 exons, is annotated with 8 domains and features, is associated with 17979 variant alleles and maps to 624 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374279.3	UGCG-001	4007	394aa	ENSP00000363397.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6782	Q16739	NM_003358.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495085.1	UGCG-005	772	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490110.1	UGCG-003	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489355.1	UGCG-002	526	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474306.1	UGCG-004	468	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 4,007 bps, Translation length: 394 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16739

CCDS

This transcript is a member of the Human CCDS set: CCDS6782

Version

ENST00000374279.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000053661 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.