Transcript: ENST00000375835.4 SHC3-001

Description

SHC (Src homology 2 domain containing) transforming protein 3 [Source:HGNC Symbol;Acc:18181]

Gene Synonyms

N-Shc, NSHC, RAI, RP11-82L18.4, SHCC

Location

About this transcript

This transcript has 12 exons, is annotated with 25 domains and features, is associated with 69008 variant alleles and maps to 628 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375835.4	SHC3-001	2394	594aa	ENSP00000364995.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6681	Q92529	NM_016848.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375830.1	SHC3-201	1981	105aa	ENSP00000364990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7I8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375831.1	SHC3-002	569	105aa	ENSP00000364991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T7I8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,394 bps, Translation length: 594 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92529

CCDS

This transcript is a member of the Human CCDS set: CCDS6681

Version

ENST00000375835.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000052986 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.