Transcript: ENST00000276893.5 UHRF2-003

Description

ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:12557]

Gene Synonyms

MGC33463, NIRF, RNF107, URF2

Location

Chromosome 9: 6,413,323-6,507,054 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 27 domains and features, is associated with 54221 variant alleles and maps to 572 oligo probes.

Gene

This transcript is a product of gene ENSG00000147854.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000276893.5	UHRF2-003	3452	802aa	ENSP00000276893.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6469	Q96PU4	NM_152896.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381373.3	UHRF2-002	802	136aa	ENSP00000370778.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AL33	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450508.1	UHRF2-004	474	112aa	ENSP00000399217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000468435.2	UHRF2-001	3723	503aa	ENSP00000434182.1	Nonsense mediated decay		Q96PU4	-	-
ENST00000485617.2	UHRF2-005	3460	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492853.1	UHRF2-006	2859	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469298.1	UHRF2-011	990	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477183.1	UHRF2-007	786	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481049.1	UHRF2-012	635	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461236.1	UHRF2-013	454	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481243.1	UHRF2-009	422	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479000.1	UHRF2-008	259	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484159.1	UHRF2-010	3112	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,452 bps, Translation length: 802 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PU4

CCDS

This transcript is a member of the Human CCDS set: CCDS6469

Version

ENST00000276893.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000051665 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000276893.5 UHRF2-003

Summary