Transcript: ENST00000519548.1 TATDN1-002

Description

TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:24220]

Gene Synonyms

CDA11

Location

Chromosome 8: 125,500,754-125,551,317 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 9 domains and features, is associated with 21753 variant alleles and maps to 426 oligo probes.

Gene

This transcript is a product of gene ENSG00000147687.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000276692.6	TATDN1-001	1018	297aa	ENSP00000276692.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6351	E5RK70 Q6P1N9	NM_032026.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522810.1	TATDN1-004	990	322aa	ENSP00000430274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RG17 E5RK70	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519548.1	TATDN1-002	889	250aa	ENSP00000428336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55273	E5RK70 Q6P1N9	NM_001146160.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517678.1	TATDN1-010	815	210aa	ENSP00000430201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGF2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000605953.1	TATDN1-020	726	210aa	ENSP00000476180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RK70 U3KQS5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523152.1	TATDN1-006	692	93aa	ENSP00000427807.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RG62	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519232.1	TATDN1-013	604	202aa	ENSP00000430481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RK70	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000523888.1	TATDN1-011	591	110aa	ENSP00000428109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RK70	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523214.1	TATDN1-003	1134	207aa	ENSP00000428609.1	Nonsense mediated decay		E5RK70 G5EA19	-	-
ENST00000522927.1	TATDN1-015	782	75aa	ENSP00000431052.1	Nonsense mediated decay		E5RJY6	-	-
ENST00000520938.1	TATDN1-009	690	62aa	ENSP00000430756.1	Nonsense mediated decay		E5RID7	-	-
ENST00000519776.1	TATDN1-007	677	40aa	ENSP00000429831.1	Nonsense mediated decay		E5RH86	-	-
ENST00000522310.1	TATDN1-008	667	40aa	ENSP00000428580.1	Nonsense mediated decay		E5RH86	-	-
ENST00000520321.1	TATDN1-016	629	56aa	ENSP00000429541.1	Nonsense mediated decay		E5RI69	-	-
ENST00000521546.1	TATDN1-012	731	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521973.1	TATDN1-019	639	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518133.1	TATDN1-014	636	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523631.1	TATDN1-005	2016	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522280.1	TATDN1-017	684	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518485.1	TATDN1-018	656	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 889 bps, Translation length: 250 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6P1N9

CCDS

This transcript is a member of the Human CCDS set: CCDS55273

Version

ENST00000519548.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000381658 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000519548.1 TATDN1-002

Summary