Transcript: ENST00000521861.1 EIF3H-001

Description

eukaryotic translation initiation factor 3, subunit H [Source:HGNC Symbol;Acc:3273]

Gene Synonyms

EIF3S3, eIF3-gamma, eIF3-p40, eIF3h

Location

Chromosome 8: 117,654,369-117,768,060 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 8 domains and features, is associated with 50336 variant alleles and maps to 488 oligo probes.

Gene

This transcript is a product of gene ENSG00000147677.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000521861.1	EIF3H-001	3959	352aa	ENSP00000429931.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6319	O15372 Q6IB98	NM_003756.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000276682.4	EIF3H-003	2041	366aa	ENSP00000276682.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KS98 E5RFW7 Q6IB98	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518949.1	EIF3H-008	843	244aa	ENSP00000428195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJT0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518995.1	EIF3H-007	731	235aa	ENSP00000428669.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGU4 E5RHC7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520813.1	EIF3H-004	562	97aa	ENSP00000427908.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFW7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000522453.1	EIF3H-009	518	170aa	ENSP00000428885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFH0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000522800.1	EIF3H-005	635	56aa	ENSP00000429884.1	Nonsense mediated decay		E5RH59	-	-
ENST00000519046.1	EIF3H-006	488	46aa	ENSP00000430926.1	Nonsense mediated decay		E5RHC7	-	-
ENST00000518034.1	EIF3H-002	1047	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520289.1	EIF3H-011	855	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000517974.1	EIF3H-010	594	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,959 bps, Translation length: 352 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15372

CCDS

This transcript is a member of the Human CCDS set: CCDS6319

Version

ENST00000521861.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000380912 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000521861.1 EIF3H-001

Summary