Transcript: ENST00000524616.1 PPAPDC1B-007

Description

phosphatidic acid phosphatase type 2 domain containing 1B [Source:HGNC Symbol;Acc:25026]

Gene Synonyms

DPPL1, HTPAP

Location

Chromosome 8: 38,121,869-38,126,714 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 14 domains and features, is associated with 2247 variant alleles and maps to 249 oligo probes.

Gene

This transcript is a product of gene ENSG00000147535.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000424479.2	PPAPDC1B-001	2130	264aa	ENSP00000392553.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47841	E9PNB1 Q8NEB5	NM_001102559.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529359.1	PPAPDC1B-005	2185	223aa	ENSP00000434916.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNB1 Q8NEB5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531823.1	PPAPDC1B-015	875	132aa	ENSP00000437248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNB1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422581.2	PPAPDC1B-002	853	216aa	ENSP00000390622.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47842	Q8NEB5	NM_032483.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524616.1	PPAPDC1B-007	831	245aa	ENSP00000432122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNB1 H0YCQ3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000419686.2	PPAPDC1B-003	794	176aa	ENSP00000414522.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47843	C9JKF5	NM_001102560.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534339.1	PPAPDC1B-006	745	244aa	ENSP00000431771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000531109.1	PPAPDC1B-016	581	60aa	ENSP00000434555.1	Nonsense mediated decay		H0YDY2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530588.1	PPAPDC1B-011	730	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531483.1	PPAPDC1B-009	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530193.1	PPAPDC1B-013	496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527758.1	PPAPDC1B-010	418	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527793.1	PPAPDC1B-014	392	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528814.1	PPAPDC1B-004	1590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530432.1	PPAPDC1B-012	607	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000524409.1	PPAPDC1B-008	492	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 831 bps, Translation length: 245 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000524616.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000381864 (version 1)

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Transcript: ENST00000524616.1 PPAPDC1B-007

Summary