Transcript: ENST00000520114.1 STAR-003

Description

steroidogenic acute regulatory protein [Source:HGNC Symbol;Acc:11359]

Gene Synonyms

STARD1, StAR

Location

About this transcript

This transcript has 4 exons, is associated with 3709 variant alleles and maps to 529 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000276449.4	STAR-001	1929	285aa	ENSP00000276449.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6102	E5RH12 P49675 Q6IBK0 Q6QNJ9	NM_000349.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522050.1	STAR-006	748	249aa	ENSP00000429009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RH12	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000521236.1	STAR-005	402	48aa	ENSP00000430030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RH12	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520114.1	STAR-003	3448	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 3,448 bps,

Version

ENST00000520114.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000376991 (version 2)