Transcript: ENST00000289957.2 CHRNB3-001

Description

cholinergic receptor, nicotinic, beta 3 (neuronal) [Source:HGNC Symbol;Acc:1963]

Location

About this transcript

This transcript has 6 exons, is annotated with 26 domains and features, is associated with 17623 variant alleles and maps to 393 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000289957.2	CHRNB3-001	2294	458aa	ENSP00000289957.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6134	Q05901	NM_000749.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534391.1	CHRNB3-002	554	9aa	ENSP00000433913.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000531610.1	CHRNB3-003	514	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,294 bps, Translation length: 458 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q05901

CCDS

This transcript is a member of the Human CCDS set: CCDS6134

Version

ENST00000289957.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000383055 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.