Transcript: ENST00000373719.3 OGT-001

Description

O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:8127]

Gene Synonyms

FLJ23071, HRNT1, MGC22921, O-GLCNAC

Location

Chromosome X: 70,752,933-70,795,747 forward strand.

About this transcript

This transcript has 22 exons, is annotated with 43 domains and features, is associated with 12811 variant alleles and maps to 1042 oligo probes.

Gene

This transcript is a product of gene ENSG00000147162.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373719.3	OGT-001	5461	1046aa	ENSP00000362824.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14414	C9JZL3 O15294	NM_181673.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373701.3	OGT-002	3310	1036aa	ENSP00000362805.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35502	O15294	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455587.1	OGT-010	632	211aa	ENSP00000407659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000444774.1	OGT-011	556	156aa	ENSP00000399729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZL3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000498566.1	OGT-004	601	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000459760.1	OGT-008	541	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488174.1	OGT-003	7243	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472270.1	OGT-009	689	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474633.1	OGT-005	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466181.1	OGT-007	421	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462638.1	OGT-006	400	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 5,461 bps, Translation length: 1,046 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15294

CCDS

This transcript is a member of the Human CCDS set: CCDS14414

Version

ENST00000373719.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000081829 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000373719.3 OGT-001

Summary