Transcript: ENST00000492618.1 CCT6A-005

Description

chaperonin containing TCP1, subunit 6A (zeta 1) [Source:HGNC Symbol;Acc:1620]

Gene Synonyms

CCT-zeta, CCT-zeta-1, CCT6, CCTZ, Cctz, HTR3, MoDP-2, TCP-1-zeta, TCP20, TCPZ, TTCP20

Location

Chromosome 7: 56,127,237-56,129,752 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1436 variant alleles and maps to 191 oligo probes.

Gene

This transcript is a product of gene ENSG00000146731.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000275603.4	CCT6A-001	2719	531aa	ENSP00000275603.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5523	P40227	NM_001762.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000335503.3	CCT6A-003	2529	486aa	ENSP00000352019.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34640	P40227	NM_001009186.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540286.1	CCT6A-201	1894	500aa	ENSP00000438488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DPJ8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462133.1	CCT6A-007	665	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482776.1	CCT6A-010	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466479.1	CCT6A-009	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492618.1	CCT6A-005	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466572.1	CCT6A-006	686	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494736.1	CCT6A-008	411	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493855.1	CCT6A-004	261	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 692 bps,

Version

ENST00000492618.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000343288 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000492618.1 CCT6A-005

Summary