Transcript: ENST00000335503.3 CCT6A-003

Description

chaperonin containing TCP1, subunit 6A (zeta 1) [Source:HGNC Symbol;Acc:1620]

Gene Synonyms

CCT-zeta, CCT-zeta-1, CCT6, CCTZ, Cctz, HTR3, MoDP-2, TCP-1-zeta, TCP20, TCPZ, TTCP20

Location

Chromosome 7: 56,119,378-56,131,682 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 23 domains and features, is associated with 6530 variant alleles and maps to 748 oligo probes.

Gene

This transcript is a product of gene ENSG00000146731.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000275603.4	CCT6A-001	2719	531aa	ENSP00000275603.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5523	P40227	NM_001762.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000335503.3	CCT6A-003	2529	486aa	ENSP00000352019.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34640	P40227	NM_001009186.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540286.1	CCT6A-201	1894	500aa	ENSP00000438488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DPJ8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462133.1	CCT6A-007	665	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482776.1	CCT6A-010	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466479.1	CCT6A-009	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492618.1	CCT6A-005	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466572.1	CCT6A-006	686	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494736.1	CCT6A-008	411	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493855.1	CCT6A-004	261	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,529 bps, Translation length: 486 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P40227

CCDS

This transcript is a member of the Human CCDS set: CCDS34640

Version

ENST00000335503.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000343286 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000335503.3 CCT6A-003

Summary