Transcript: ENST00000378610.1 CDKAL1-001

Description

CDK5 regulatory subunit associated protein 1-like 1 [Source:HGNC Symbol;Acc:21050]

Gene Synonyms

FLJ20342

Location

About this transcript

This transcript has 14 exons, is annotated with 16 domains and features, is associated with 283931 variant alleles and maps to 562 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274695.4	CDKAL1-201	3272	579aa	ENSP00000274695.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4546	Q5VV42	NM_017774.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378610.1	CDKAL1-001	3115	579aa	ENSP00000367873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4546	Q5VV42	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378624.4	CDKAL1-202	3096	488aa	ENSP00000367889.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VV42	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476517.1	CDKAL1-002	840	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 3,115 bps, Translation length: 579 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5VV42

CCDS

This transcript is a member of the Human CCDS set: CCDS4546

Version

ENST00000378610.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000039986 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.