Transcript: ENST00000515800.2 RASA1-005

Description

RAS p21 protein activator (GTPase activating protein) 1 [Source:HGNC Symbol;Acc:9871]

Gene Synonyms

CM-AVM, CMAVM, GAP, PKWS, RASA, RASGAP, p120GAP, p120RASGAP

Location

Chromosome 5: 86,563,705-86,687,736 forward strand.

About this transcript

This transcript has 26 exons, is annotated with 31 domains and features, is associated with 54512 variant alleles and maps to 919 oligo probes.

Gene

This transcript is a product of gene ENSG00000145715.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274376.6	RASA1-001	3752	1047aa	ENSP00000274376.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34200	B4DTL8 P20936	NM_002890.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456692.2	RASA1-002	3776	870aa	ENSP00000411221.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47243	B4DTL8 P20936	NM_022650.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512763.1	RASA1-004	3060	880aa	ENSP00000422008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DTL2 B4DTL8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506290.1	RASA1-003	3009	881aa	ENSP00000420905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DTL8 E9PGC0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515800.2	RASA1-005	4979	539aa	ENSP00000423395.2	Nonsense mediated decay		Q68CU6	-	-
ENST00000509953.1	RASA1-007	802	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 26, Coding exons: 12, Transcript length: 4,979 bps, Translation length: 539 residues

Version

ENST00000515800.2

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000369733 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000515800.2 RASA1-005

Summary