Transcript: ENST00000523508.1 BHMT-007

Description

betaine--homocysteine S-methyltransferase [Source:HGNC Symbol;Acc:1047]

Gene Synonyms

BHMT1, HEL-S-61p

Location

Chromosome 5: 78,416,175-78,422,120 forward strand.

About this transcript

This transcript has 3 exons, is associated with 2669 variant alleles and maps to 96 oligo probes.

Gene

This transcript is a product of gene ENSG00000145692.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274353.5	BHMT-001	2497	406aa	ENSP00000274353.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4046	Q93088	NM_001713.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524080.1	BHMT-003	1207	253aa	ENSP00000428240.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJH0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520335.1	BHMT-004	748	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000521279.1	BHMT-006	711	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520703.1	BHMT-005	591	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523508.1	BHMT-007	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 590 bps,

Version

ENST00000523508.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000370909 (version 1)

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Transcript: ENST00000523508.1 BHMT-007

Summary