Transcript: ENST00000473088.1 IQSEC1-004

Description

IQ motif and Sec7 domain 1 [Source:HGNC Symbol;Acc:29112]

Gene Synonyms

ARF-GEP100, ARFGEP100, BRAG2, GEP100, KIAA0763

Location

About this transcript

This transcript has 3 exons, is associated with 25599 variant alleles and maps to 84 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273221.4	IQSEC1-001	5279	963aa	ENSP00000273221.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33703	Q6DN90	NM_014869.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450726.1	IQSEC1-002	3745	937aa	ENSP00000397811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000429247.1	IQSEC1-003	3583	1160aa	ENSP00000402299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMG9	NM_001134382.2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473088.1	IQSEC1-004	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474467.1	IQSEC1-005	436	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 545 bps,

Version

ENST00000473088.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000340095 (version 1)