Transcript: ENST00000472985.1 DYNC1LI1-004

Description

dynein, cytoplasmic 1, light intermediate chain 1 [Source:HGNC Symbol;Acc:18745]

Gene Synonyms

DNCLI1, LIC1

Location

Chromosome 3: 32,571,122-32,578,764 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 3330 variant alleles and maps to 161 oligo probes.

Gene

This transcript is a product of gene ENSG00000144635.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273130.4	DYNC1LI1-001	2504	523aa	ENSP00000273130.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2654	B3KM42 Q9Y6G9	NM_016141.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432458.2	DYNC1LI1-003	1827	407aa	ENSP00000407279.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHI6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424991.1	DYNC1LI1-006	666	192aa	ENSP00000409019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLW1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000413350.1	DYNC1LI1-008	616	190aa	ENSP00000390507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JGM7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000481915.1	DYNC1LI1-002	4791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475193.1	DYNC1LI1-005	814	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472985.1	DYNC1LI1-004	646	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474077.1	DYNC1LI1-007	605	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 646 bps,

Version

ENST00000472985.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000342171 (version 1)

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Transcript: ENST00000472985.1 DYNC1LI1-004

Summary