Transcript: ENST00000273130.4 DYNC1LI1-001

Description

dynein, cytoplasmic 1, light intermediate chain 1 [Source:HGNC Symbol;Acc:18745]

Gene Synonyms

DNCLI1, LIC1

Location

Chromosome 3: 32,567,463-32,612,366 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 12 domains and features, is associated with 21058 variant alleles and maps to 576 oligo probes.

Gene

This transcript is a product of gene ENSG00000144635.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273130.4	DYNC1LI1-001	2504	523aa	ENSP00000273130.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2654	B3KM42 Q9Y6G9	NM_016141.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432458.2	DYNC1LI1-003	1827	407aa	ENSP00000407279.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHI6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424991.1	DYNC1LI1-006	666	192aa	ENSP00000409019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLW1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000413350.1	DYNC1LI1-008	616	190aa	ENSP00000390507.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JGM7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000481915.1	DYNC1LI1-002	4791	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475193.1	DYNC1LI1-005	814	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472985.1	DYNC1LI1-004	646	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474077.1	DYNC1LI1-007	605	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,504 bps, Translation length: 523 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y6G9

CCDS

This transcript is a member of the Human CCDS set: CCDS2654

Version

ENST00000273130.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000253250 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000273130.4 DYNC1LI1-001

Summary