Transcript: ENST00000430365.2 VGLL4-003

Description

vestigial like 4 (Drosophila) [Source:HGNC Symbol;Acc:28966]

Gene Synonyms

KIAA0121, VGL-4

Location

Chromosome 3: 11,599,950-11,685,398 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 40239 variant alleles and maps to 231 oligo probes.

Gene

This transcript is a product of gene ENSG00000144560.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000430365.2	VGLL4-003	1377	296aa	ENSP00000404251.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46754	C9JBN2 C9JX59 G5E9M7 G5E9M9 Q0H0I7	NM_001128219.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000273038.3	VGLL4-001	3725	290aa	ENSP00000273038.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2606	C9JBN2 C9JX59 E7EQU6 E7EUJ2 E7EWF5 G5E9M9 Q0H0I7 Q14135	NM_014667.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413604.1	VGLL4-004	1554	231aa	ENSP00000404624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68342	C9JBN2 C9JX59 G5E9M9 Q0H0I7	NM_001284391.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404339.1	VGLL4-201	1424	295aa	ENSP00000384705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68343	C9JBN2 C9JX59 G5E9F4 G5E9M9 Q0H0I7	NM_001284390.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000424529.2	VGLL4-006	1025	206aa	ENSP00000402878.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46756	Q0H0I7 Q14135	NM_001128221.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451674.2	VGLL4-005	938	210aa	ENSP00000416615.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46755	Q0H0I7 Q14135	NM_001128220.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418000.1	VGLL4-017	792	200aa	ENSP00000394439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBN2 C9JX59 E7EQU6 E7EUJ2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000458499.1	VGLL4-010	766	190aa	ENSP00000394123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBN2 C9JX59 E7ERW0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000445411.1	VGLL4-014	726	223aa	ENSP00000412923.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBN2 C9JX59 E7EQU6 E7EUJ2 E7EWF5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417206.2	VGLL4-015	581	169aa	ENSP00000391932.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBN2 C9JX59 E7EUJ2 F8W708	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000437722.1	VGLL4-008	544	60aa	ENSP00000393100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JX59	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000419541.1	VGLL4-013	466	127aa	ENSP00000395557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JX59 E7EUJ2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000424709.1	VGLL4-007	437	81aa	ENSP00000391554.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JBN2 C9JX59	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000426568.1	VGLL4-002	1428	41aa	ENSP00000413030.1	Nonsense mediated decay		Q14135	-	-
ENST00000417466.1	VGLL4-016	894	31aa	ENSP00000411670.1	Nonsense mediated decay		F8WBN7	-	-
ENST00000480288.1	VGLL4-009	586	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463387.1	VGLL4-012	238	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,377 bps, Translation length: 296 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS46754

Version

ENST00000430365.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000339133 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000430365.2 VGLL4-003

Summary